Cytel's LogXact 5 vs. SAS's PROC LOGISTIC:
Urinary Tract Infection and Contraceptive Use
(Source: LogXact 5 user guide, from data gathered at the University of Michigan's Dept. of Epidemiology.)How is the development of first-time urinary tract infection (UTI) related to contraceptive use? A study of sexually active college women with UTI was conducted, and their use of various contraceptives was surveyed.
(437 observations, 9 covariates.) Covariates:
AGE: 1=age>=24
OC: 1 = oral contraceptive
CURRENT: 1 = no regular current sex partner
PASTYR: 1 = no regular partner with relationship < 1yr
VI: 1 = vaginal intercourse
VIC: 1 = vaginal intercourse with condom
VICL: 1 = vaginal intercourse with lubricated condom
VIS: 1 = vaginal intercourse with spermicide
DIA: 1 = diaphragm use
The results are displayed below. Of note is the role played by the covariate for diaphragm use-DIA. The primary question is whether the use of diaphragm is risky in the presence of other confounders Standard maximum likelihood logistic regression will not produce a model fit if this covariate is included, and yet this is an important covariate -- all seven diaphragm users developed UTI. Exact logistic regression is required for fitting this model, and SAS's PROC LOGISTIC cannot do it. Only LOGXACT 5 can solve the problem.
LOGXACT 5 RESULTS
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Parameter Estimates
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Point Estimate Confidence interval and P-value for Beta
Type Beta SE(Beta) Type 95.0% C.I. Pvalue SE
Lower Upper 2*1-sided
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age MLE ? ? Asymptotic ? ? ?
current MLE ? ? Asymptotic ? ? ?
dia MLE ? ? Asymptotic ? ? ?
MUE 2.0500 NA Monte Carlo -0.0726 +INF 0.0564 0.0033
( Seed=1035236606,Samples=10000 )
oc MLE ? ? Asymptotic ? ? ?
pastyr MLE ? ? Asymptotic ? ? ?
vi MLE ? ? Asymptotic ? ? ?
vic MLE ? ? Asymptotic ? ? ?
vicl MLE ? ? Asymptotic ? ? ?
vis MLE ? ? Asymptotic ? ? ?
%CONST MLE ? ? Asymptotic ? ? ?
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Analysis time :00:10:19
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SAS's PROC LOGISTIC RESULTS
WARNING: There is not enough memory available for exact computations.
Try it yourself!
The links below include data files and SAS code that you can download.
LOGXACT 5--
Download LogXact data
View Instructions for LogXact-5 analysis
PROC LOGISTIC--
Download SAS code (includes data)
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